BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033A02LP1|AL429658
(864 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1102 1200 0.0
>3x_Contig1102
Length = 3442
Score = 1200 bits (605), Expect = 0.0
Identities = 606/607 (99%)
Strand = Plus / Plus
Query: 258 actttattcaaattctctatataaagcattaacatagtaaattaagagcttccactaagt 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actttattcaaattctctatataaagcattaacatagtaaattaagagcttccactaagt 60
Query: 318 atatgaagaaacgtgaaattgctgaaaaagaggaatcacgtgcacggtgttccttaagat 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atatgaagaaacgtgaaattgctgaaaaagaggaatcacgtgcacggtgttccttaagat 120
Query: 378 aagtgacacggcttcgtatgtggttttagaaatctaagttcgtggtatgagattgttgat 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagtgacacggcttcgtatgtggttttagaaatctaagttcgtggtatgagattgttgat 180
Query: 438 gttcatcttgaggtggacgtgccttctgcattgatgagtctttattttttttattggaat 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttcatcttgaggtggacgtgccttctgcattgatgagtctttattttttttattggaat 240
Query: 498 catcttcgtcttccactgggataccccattcttctatctcaaatctctttcttccattct 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catcttcgtcttccactgggataccccattcttctatctcaaatctctttcttccattct 300
Query: 558 tgaacgcccattcagacttggaaacgtgcatttcacctcgttcactgaacaccggaagtt 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgaacgcccattcagacttggaaacgtgcatttcacctcgttcactgaacaccggaagtt 360
Query: 618 tcttgatatgtactaaaccgtgttgaatcttatttggttgggatttgtatgctctttcca 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcttgatatgtactaaaccgtgttgaatcttatttggttgggatttgtatgctctttcca 420
Query: 678 aaaactgaagcatctcctggccgaatggttcaaggacgattacaccgtcgaagagttgtt 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaactgaagcatctcctggccgaatggttcaaggacgattacaccgtcgaagagttgtt 480
Query: 738 caatctgagccgtgaaaagtggttggttgtgatagagactggttgagattgtagagagca 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caatctgagccgtgaaaagtggttggttgtgatagagactggttgagattgtagagagca 540
Query: 798 tcacacatctttccttatatttcttcaatagagatctgagtycgtgtagtaacggaatta 857
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 541 tcacacatctttccttatatttcttcaatagagatctgagtccgtgtagtaacggaatta 600
Query: 858 attcatg 864
|||||||
Sbjct: 601 attcatg 607
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7565
Number of Sequences: 1807
Number of extensions: 7565
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 864
length of database: 10,358,551
effective HSP length: 16
effective length of query: 848
effective length of database: 10,329,639
effective search space: 8759533872
effective search space used: 8759533872
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)